BioJS component to visualize KEGG Pathways
نویسندگان
چکیده
Signaling pathways provide essential information on complex Summary: regulatory processes within the cell. They are moreover widely used to interpret and integrate data from large-scale studies, such as expression or functional screens. We present KEGGViewer a BioJS component to visualize KEGG pathways and to allow their visual integration with functional data. KEGGViewer is an open-source tool freely available at the BioJS Availability: Registry. Instructions on how to use the tool are available at http://goo.gl/dVeWpg and the source code can be found at and DOI: . http://github.com/biojs/biojs 10.5281/zenodo.7708 This article is included in the BioJS Bianca H. Habermann ( ) Corresponding author: [email protected] Villaveces JM, Jimenez RC and Habermann BH. How to cite this article: , a BioJS component to visualize KEGG Pathways KEGGViewer 2014, :43 (doi: ) [v1; ref status: indexed, ] http://f1000r.es/2uq F1000Research 3 10.12688/f1000research.3-43.v1 © 2014 Villaveces JM . This is an open access article distributed under the terms of the , Copyright: et al Creative Commons Attribution Licence which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. JMV was financed by BMBF-grant 315737 (Virtual Liver Network). This work was supported by the Max Planck Society. Grant information: The funders had no role in study design, data collection and analysis, decision to publish, or preparation of the manuscript. Competing interests: No competing interests were disclosed. 13 Feb 2014, :43 (doi: ) First published: 3 10.12688/f1000research.3-43.v1 28 Feb 2014, :43 (doi: ) First indexed: 3 10.12688/f1000research.3-43.v1 1 2
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Signaling pathways provide essential information on complex Summary: regulatory processes within the cell. They are moreover widely used to interpret and integrate data from large-scale studies, such as expression or functional screens. We present KEGGViewer a BioJS component to visualize KEGG pathways and to allow their visual integration with functional data. KEGGViewer is an open-source tool...
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تاریخ انتشار 2015